PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00750.1.p
Common NameLOC105968013, MIMGU_mgv1a006656mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family TCP
Protein Properties Length: 437aa    MW: 47198.6 Da    PI: 7.1083
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00750.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP108.31.2e-3337155289
               TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg... 88 
                       +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak +i+el++++  ++++c    +++ss +++ + ++   
  Migut.M00750.1.p  37 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSSIDELAQLPPWHPTNCsapPPNNSSFEQH-EAAAaaa 128
                       79**************************************************************555555554421222222222.1111111 PP

               TCP  89 ..........................k 89 
                                                 k
  Migut.M00750.1.p 129 eldhnhhqlglqhddlminsvsgassK 155
                       111112223333333334333333331 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.5E-3137135IPR005333Transcription factor, TCP
PROSITE profilePS5136932.7463997IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0009965Biological Processleaf morphogenesis
GO:0030154Biological Processcell differentiation
GO:0045962Biological Processpositive regulation of development, heterochronic
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MAESSHPPSR VRLRNGGGGG GGGEIVEVQG GHIVRSTGRK DRHSKVCTAK GPRDRRVRLA  60
AHTAIQFYDV QDRLGYDRPS KAVDWLIKKA KSSIDELAQL PPWHPTNCSA PPPNNSSFEQ  120
HEAAAAAAEL DHNHHQLGLQ HDDLMINSVS GASSKRSMAA MLGGGEDRGQ SSSFLPPSLD  180
SDAIADTIKS FFPMGASAVA SSCSAAMQQQ QFHSFPTPDF LQSRNTSHSQ DLKLSLHSFQ  240
DPILLHHHHN QQNPTHHNTE QTNQEQHIQG HVLLSGIPLG FDGTSGWGAE HHHQQAAELS  300
RFHRQQSWNS GGGGGGGDSG NYLFNSPSQP MLQQLLGQNQ NQNQNQFVSQ RGPLQSSNTP  360
SIRAWMDPSA TAISTTSTTT SSDQHYHHHL PIYPLGFGSG IGSFSGFNIP ARIQGDQEVH  420
DGYPDKPSSA SSDSRH*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00009PBMTransfer from 929286Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012848057.10.0PREDICTED: transcription factor TCP4-like
SwissprotQ8LPR58e-98TCP4_ARATH; Transcription factor TCP4
TrEMBLA0A022RYC60.0A0A022RYC6_ERYGU; Uncharacterized protein
STRINGPGSC0003DMT4000322681e-129(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32072349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.12e-67TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3